Version: 7.5.0
Date: Fri Dec 13 2024
All
All
Gene
Gene Ontology
Disease
Allele/Variant
Model
HTP Dataset Index
Home
Data and Tools
Downloads
API
AllianceMine
JBrowse 2
Submit Data
Textpresso
Tools and Prototypes
COVID-19 Information
Members
FlyBase
Mouse Genome Database
Rat Genome Database
Saccharomyces Genome Database
WormBase
Xenbase
Zebrafish Information Network
Gene Ontology Consortium
News
News and Events
Release Notes
Event Calendar
About
About Us
Funding
Publications
Organization and Governance
Privacy, Warranty, Licensing, and Data Preservation Commitment
Working Groups
Help
FAQ / Known Issues
Glossary
Tutorials
User Documentation
Community
Alliance User Community
Mastodon
Bluesky
Contact Us
Cite Us
gfpt1.S
Xenopus laevis
Xenbase:XB-GENEPAGE-493901
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
gfpt1.S
Species
Xenopus laevis
Symbol
gfpt1.S
Name
glutamine--fructose-6-phosphate transaminase 1
Synonyms
gfat
gfpt1.S
Show All 3
Biotype
gene
Automated Description
Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 12 and obesity. Orthologous to human GFPT1 (glutamine--fructose-6-phosphate transaminase 1).
XBXL Description
hexosamine biosynthetic pathway regulating enzyme
https://www.xenbase.org/gene/showgene.do?method=display&geneId=493901
Cross References
NCBI_Gene:414702
RefSeq:XP_041444092
Additional Information
Literature
Orthology
Gene tree
Not Available
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
> 13
Species:
All
Homo sapiens
Xenopus tropicalis
Methods:
All
Xenbase
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
ZFIN
Show additional filters
Reset filters
Species
Gene symbol
Count
Best
Best reverse
Method
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Homo sapiens
GFPT1
1 of 1
Yes
Yes
☑
Xenopus tropicalis
gfpt1
1 of 1
Yes
Yes
☑
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
Models
Sequence Feature Viewer
Genome location
Chr3S:29854754...29888531
- (33.78 kb)
Assembly version
XL9.2
Viewer Help
29.855M
29.860M
29.865M
29.870M
29.875M
29.880M
29.885M
Sequence Details
Loading...
Expression
Primary Sources
XBXL
Other Sources
None
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
You need to enable JavaScript to run this app.