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Date: Fri Dec 13 2024
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cd53.L
Xenopus laevis
Xenbase:XB-GENEPAGE-868553
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
cd53.L
Species
Xenopus laevis
Symbol
cd53.L
Name
CD53 molecule
Synonyms
CD53 molecule
cd53.L
Show All 4
Biotype
gene
Automated Description
Predicted to be located in membrane. Orthologous to human CD53 (CD53 molecule).
XBXL Description
Tetraspanin family integral membrane protein
https://www.xenbase.org/gene/showgene.do?method=display&geneId=868553
Cross References
NCBI_Gene:495154
RefSeq:NP_001088317
Show All 4
Additional Information
Literature
Orthology
Gene tree
Not Available
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
> 13
Species:
All
Homo sapiens
Xenopus tropicalis
Methods:
All
Xenbase
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
ZFIN
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Species
Gene symbol
Count
Best
Best reverse
Method
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Homo sapiens
CD53
1 of 1
Yes
Yes
☑
Xenopus tropicalis
cd53
1 of 1
Yes
Yes
☑
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
Models
No data available
Sequence Feature Viewer
Genome location
Chr2L:52919212...52938975
- (19.76 kb)
Assembly version
XL9.2
Viewer Help
52.920M
52.922M
52.924M
52.926M
52.928M
52.930M
52.932M
52.934M
52.936M
52.938M
Sequence Details
Loading...
Expression
Primary Sources
XBXL
Other Sources
None
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
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