Version: 8.0.0Date: Tue Jan 28 2025
Gene
rnf13
- Species
- Xenopus tropicalis
- Symbol
- rnf13
- Name
- ring finger protein 13
- Synonyms
- ring finger protein 13
- rnf13
- Biotype
- gene
- Automated Description
- Predicted to enable metal ion binding activity. Predicted to be located in several cellular components, including cytoplasm; endomembrane system; and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 73. Orthologous to human RNF13 (ring finger protein 13).
- XBXT Description
- mediator of ubiquitin ligase activityhttps://www.xenbase.org/gene/showgene.do?method=display&geneId=954770
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- Not Available
Stringency:
Additional filters to further constrain the results:
| Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
|---|---|---|---|---|---|
| Homo sapiens | RNF13 | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
| Mus musculus | Rnf13 | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
| Rattus norvegicus | Rnf13 | 4 of 9 | Yes | Yes | ☐ ☐☐☑☑☐☑☑☐ |
| Xenopus laevis | rnf13.L | 1 of 1 | Yes | Yes | ☑ |
| Xenopus laevis | rnf13.S | 1 of 1 | Yes | Yes | ☑ |
| Danio rerio | rnf13 | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
| Drosophila melanogaster | gzl | 2 of 9 | Yes | Yes | ☐ ☐☐☐☑☐☐☑☐ |
| Caenorhabditis elegans | C18B12.4 | 3 of 9 | Yes | Yes | ☐ ☐☐☐☑☐☑☑☐ |
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Disease Associations
Cases where the expected disease association was NOT found
| all annotations | all disease by infectious agent | bacterial infectious disease | fungal infectious disease | parasitic infectious disease | viral infectious disease | all disease of anatomical entity | cardiovascular system disease | central nervous system disease | endocrine system disease | gastrointestinal system disease | hematopoietic system disease | immune system disease | integumentary system disease | musculoskeletal system disease | peripheral nervous system disease | reproductive system disease | respiratory system disease | sensory system disease | thoracic disease | urinary system disease | all disease of cellular proliferation | benign neoplasm | cancer | pre-malignant neoplasm | all genetic disease | chromosomal disease | monogenic disease | polygenic disease | all other disease | disease of mental health | disease of metabolism | physical disorder | syndrome | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rnf13 (Xtr) |
Cell color indicative of annotation volume
No data available
Sequence Feature Viewer
- Genome location
- Chr05:115148148...115186241 - (38.09 kb)
- Assembly version
- XT9.1
- Viewer Help
Expression
- Primary Sources
- Other Sources
- None
| all annotations | all anatomical structures | alimentary part of gastrointestinal system | chemosensory system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | mechanosensory system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | vestibulo-auditory system | visual system | endoderm | ectoderm | mesoderm | mesenchyme | adipose tissue | appendage | entire extraembryonic component | imaginal precursor | pharyngeal arch | other | all stages | embryo stage | post embryonic, pre-adult | post-juvenile adult stage | all cellular components | extracellular region | plasma membrane | synapse | cell junction | cell projection | cytoplasmic vesicle | endosome | vacuole | golgi apparatus | endoplasmic reticulum | cytosol | mitochondrion | nucleus | chromosome | cytoskeleton | protein-containing complex | other locations | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rnf13 (Xtr) |
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.