Gene

si:ch211-194g2.4

Species
Danio rerio
Symbol
si:ch211-194g2.4
Name
si:ch211-194g2.4
Synonyms
None
Biotype
protein coding gene
Automated Description
Not Available
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
No ortholog matching your filter. Please try a less stringent filter.
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
egfl612 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
si:ch211-194g2.4 (Dre)
Cell color indicative of annotation volume
No data available

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
35.8630M35.8635M35.8640M35.8645M35.8650M35.8655M35.8660M35.8665M35.8670M35.8675Msi:ch211-194g2.4-201 (si:ch211-194g2.4)

Sequence Details

Transcript: Mode:

 

>si:ch211-194g2.4-201-cds 1:35,862,550-35,867,943(+)
atGCCATTTAAAAGCTATATAAAGGGCCGTGTCCATCTACAAGTCTTGATCATTGGACTTCTCTTTGTACTTCCTGATACAGTCATTCCTCAAAGACTGAAGACACTGCTATCAGAACAGAGGGCACCAGGGGTTTGTGCGCTAGAGCCATCTATGACCTGCTGCTATGGATGGAGGAACATTAACGGTGTCTGTCAACCTATATGTAAGAGACCCTGTGAGAATGGATTCTGTATTGGGCCTGATCGATGCTCGTGCATGGAGGGCTACAAGGGCAAAGACTGCAGCGAAGatGTCAATGAGTGTGGGCTCCCAGAAAGGCCCTGTTCACACAGCTGCATGAACACAATGGGGAGTTACCGTTGTTTCTGCAATAATGGACACACTCTGGACACTGATGGCAAATCCTGCATCAAGAAACTGGACTGCATCTCCCTTCGCTGTCAGTTTGGTTGCCAAATTGACAGAAATGATGAAGTGGGCTGTGTCTGTCCTCCAGGATTACAACTTGCACCAGATTATAGAACCTGCAAAGacATCAATGAGTGTGATGATCCCTCACACACCTGCACAGAACAccagtcctgcaagaacacttttggGAGTTTCACTTGTGTCTGTAAAGACGGATTTATCTTGGGAACACTCCAAGACACAATCACTTGTCGAGGTATT

 Legend:

  • Up/downstream
  • UTR
  • Coding
  • Intron
  • Genomic (i.e., unprocessed)
  • Amino acid

 IMPORTANT NOTE: Transcript and protein sequences here are derived from GFF coordinate mapping to the reference assembly. It is possible that this sequence differs from the transcript or amino acid sequence reported in NCBI RefSeq when the transcript or protein has its own NCBI RefSeq entry that differs from the genome assembly.

 Upper case bases for noncoding transcripts indicate mature transcript sequence (i.e., spliced exons when applicable) and for coding transcripts indicate mature transcript's coding region (i.e., CDS).

Expression

Primary Sources
None
Other Sources
all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
si:ch211-194g2.4 (Dre)
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available