Version: 8.0.0Date: Tue Jan 28 2025
Gene
cntnap5l
- Species
- Danio rerio
- Symbol
- cntnap5l
- Name
- contactin associated protein family member 5 like
- Synonyms
- cntnap5
- zmp:0000001142
- Biotype
- protein coding gene
- Automated Description
- Predicted to be involved in anatomical structure morphogenesis. Predicted to be located in membrane. Orthologous to human CNTNAP5 (contactin associated protein family member 5).
- ZFIN Description
- Not Available
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- PANTHER:PTHR15036
Stringency:
Additional filters to further constrain the results:
| Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
|---|---|---|---|---|---|
| Homo sapiens | CNTNAP5 | 4 of 10 | Yes | No | ☑ ☐☐☐☑☐☑☑☐ ☐ |
| Mus musculus | Cntnap5c | 7 of 10 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ ☐ |
| Mus musculus | Cntnap5a | 7 of 10 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ ☐ |
| Mus musculus | Cntnap5b | 7 of 10 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ ☐ |
| Rattus norvegicus | Cntnap5bl1 | 7 of 9 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ |
| Rattus norvegicus | Cntnap5c | 7 of 9 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ |
| Rattus norvegicus | Cntnap5a | 7 of 9 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ |
| Rattus norvegicus | Cntnap5b | 7 of 9 | Yes | No | ☑ ☐☑☑☑☐☑☑☑ |
| Xenopus tropicalis | cntnap4 | 3 of 9 | Yes | No | ☐ ☐☑☑☐☐☐☐☑ |
| Drosophila melanogaster | Nrx-IV | 7 of 10 | Yes | No | ☑ ☐☑☑☑☑☑☐☑ ☐ |
| Caenorhabditis elegans | nlr-1 | 6 of 9 | Yes | No | ☑ ☐☑☐☑☑☑☐☑ |
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Paralogy
| Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
|---|---|---|---|---|---|---|
| cntnap5b | 1 | 1327 | 75 | 59 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
| cntnap5a | 2 | 1305 | 73 | 56 | 6 of 8 | ☑ ☑☐☑☑☑☐☑ |
| cntnap3 | 3 | 1327 | 63 | 44 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
| cntnap2b | 4 | 1329 | 61 | 43 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
| cntnap2a | 5 | 1304 | 62 | 44 | 6 of 8 | ☐ ☑☐☑☑☑☑☑ |
| cntnap1 | 6 | 1321 | 53 | 34 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
| nrxn1a | 7 | 1581 | 36 | 21 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
| nrxn3a | 8 | 1510 | 36 | 22 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
| nrxn3b | 9 | 1472 | 36 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
| nrxn1b | 10 | 1297 | 38 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
| nrxn2a | 11 | 1245 | 39 | 24 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
Disease Associations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species | Gene | Association | Disease Qualifier | Disease | Evidence | Source | Based On | References |
|---|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | ||||||||
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Alleles and Variants
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | |||||||
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Sequence Feature Viewer
- Genome location
- Chr11:33426510...33554791 (128.28 kb)
- Assembly version
- GRCz11
- Viewer Help
Data currently unavailable; sequence viewer under construction