Version: 8.0.0Date: Tue Jan 28 2025
Gene Biological Process: inner ear development
Sox9
(Rattus norvegicus)Gene
Name: SRY-box transcription factor 9
Synonyms: SRY-box containing gene 9, LOC363699, SRY (sex determining region Y)-box 9, SRY box 9, transcription factor SOX-9, LOC100361122, SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal), SRY
Source: RGD:620474
Biotype: protein coding gene
Msx1
(Mus musculus)Gene
Name: msh homeobox 1
Synonyms: Hox-7, msh, AA675338, expressed sequence AI324650, homeo box-7 cluster, msh-like, Hox7, AI324650, expressed sequence AA675338, muscle-segment homeobox, Hox7.1
Source: MGI:97168
Biotype: protein coding gene
pax2a
(Danio rerio)Gene
Name: paired box 2a
Synonyms: no isthmus, pax2.1, pax-b, cb378, pax[zf-b], pax2a1, Pax-2, noi, Pax2.1, paxb
Source: ZFIN:ZDB-GENE-990415-8
Biotype: protein coding gene
fgf8a
(Danio rerio)Gene
Name: fibroblast growth factor 8a
Synonyms: cb110, ace, id:ibd5031, wu:fb73a06, etID309886.13, acerebellar, fgf8, fgf-8
Source: ZFIN:ZDB-GENE-990415-72
Biotype: protein coding gene
Shh
(Mus musculus)Gene
Name: sonic hedgehog
Synonyms: hedgehog gene 1, Dsh, Hhg1, short digits, ShhNC
Source: MGI:98297
Biotype: protein coding gene
Bmp4
(Mus musculus)Gene
Name: bone morphogenetic protein 4
Synonyms: Bmp2b, bone morphogenetic protein 2b, BOMPR4A, Bmp2b-1, Bmp-4, bone morphogenetic protein 2b 1, Bmp2b1
Source: MGI:88180
Biotype: protein coding gene
H2-K1
(Mus musculus)Gene
Name: histocompatibility 2, K1, K region
Synonyms: RT1-A2n, RT1-CE12, rt1-El, RT1-A, RT1-CE7, RT1-E2, RT1A-1, RT1A-2, RT1-C/E1, RT1-C/E5, RT1.A2(N), RT1-C/E3, RT1-C/E4, RT1.A1(N), RT1-A1n, RT1-C/E7, H-2K
Source: MGI:95904
Biotype: protein coding gene
sox9a
(Danio rerio)Gene
Name: SRY-box transcription factor 9a
Synonyms: jellyfish, wu:fj17b12, zgc:111921, jef
Source: ZFIN:ZDB-GENE-001103-1
Biotype: protein coding gene
FGFR3
(Homo sapiens)Gene
Name: fibroblast growth factor receptor 3
Synonyms: tyrosine kinase JTK4, JTK4, HSFGFR3EX, ACH, CEK2, fibroblast growth factor receptor 3 variant 4, achondroplasia, thanatophoric dwarfism, CD333, fibroblast growth factor receptor 3-S, hydroxyaryl-protein kinase, FGFR-3
Source: HGNC:3690
Biotype: protein coding gene
SOD1
(Homo sapiens)Gene
Name: superoxide dismutase 1
Synonyms: Cu/Zn superoxide dismutase, ALS, SOD, superoxide dismutase [Cu-Zn], indophenoloxidase A, HEL-S-44, superoxide dismutase 1, soluble, epididymis secretory protein Li 44, SOD, soluble, STAHP, hSod1, superoxide dismutase, cystolic, superoxide dismutase, ALS1, IPOA, homodimer
Source: HGNC:11179
Biotype: protein coding gene
Tgfb1
(Mus musculus)Gene
Name: transforming growth factor, beta 1
Synonyms: Tgfb-1, TGF-beta 1, Tgfb, TGFbeta1, TGF-beta1
Source: MGI:98725
Biotype: protein coding gene
BMP4
(Homo sapiens)Gene
Name: bone morphogenetic protein 4
Synonyms: MCOPS6, bone morphogenetic protein 2B, bone morphogenetic protein 4 preproprotein, BMP2B, OFC11, BMP-2B, BMP-4, ZYME, BMP2B1
Source: HGNC:1071
Biotype: protein coding gene
shha
(Danio rerio)Gene
Name: sonic hedgehog signaling molecule a
Synonyms: shh, vertebrate hedgehog homolog, sonic you, sonic-you, vhh1, fc83d08, syu, wu:fc83d08
Source: ZFIN:ZDB-GENE-980526-166
Biotype: protein coding gene
CDH1
(Homo sapiens)Gene
Name: cadherin 1
Synonyms: BCDS1, LCAM, calcium-dependent adhesion protein, epithelial, cell-CAM 120/80, ECAD, CDHE, cadherin 1, E-cadherin (epithelial), CAM 120/80, UVO, uvomorulin, cadherin 1, type 1, E-cadherin (epithelial), E-cadherin 1, cadherin 1, type 1, E-Cadherin, CD324, cadherin-1, epithelial cadherin, Arc-1, truncated cadherin 1 type 1
Source: HGNC:1748
Biotype: protein coding gene
FOXG1
(Homo sapiens)Gene
Name: forkhead box G1
Synonyms: forkhead-like 1, forkhead-like 4, forkhead-like 3, forkhead-like 2, HBF2, FHKL3, FKH2, oncogene QIN, Forkhead, drosophila, homolog-like 2, FOXG1B, FOXG1A, forkhead box o1, FOXG1C, KHL2, forkhead (Drosophila)-like 2, HBF-2, HFK2, HFK1, HBF-1, HBF-3, HFK3, BF1, BF2, HBF-G2, FKHL2, FKHL1, FKHL4, FKHL3, QIN, forkhead box protein G1, forkhead box G1C, brain factor 1, brain factor 2, forkhead box G1B
Source: HGNC:3811
Biotype: protein coding gene
CDKN1B
(Homo sapiens)Gene
Name: cyclin dependent kinase inhibitor 1B
Synonyms: CDKN4, cyclin-dependent kinase inhibitor 1B, MEN1B, MEN4, P27KIP1, KIP1, cyclin-dependent kinase inhibitor 1B (p27, Kip1)
Source: HGNC:1785
Biotype: protein coding gene
Bdnf
(Mus musculus)Gene
Name: brain derived neurotrophic factor
Synonyms: Not Available
Source: MGI:88145
Biotype: protein coding gene
Fgf8
(Mus musculus)Gene
Name: fibroblast growth factor 8
Synonyms: androgen induced growth factor, Fgf6c, Aigf, Fgf-8
Source: MGI:99604
Biotype: protein coding gene
KCNMA1
(Homo sapiens)Gene
Name: potassium calcium-activated channel subfamily M alpha 1
Synonyms: BK channel, maxi K channel, MGC71881, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, DKFZp686K1437, calcium-activated potassium channel, subfamily M subunit alpha-1, SLO-ALPHA, calcium-activated potassium channel subunit alpha-1, BK channel alpha subunit, KCa1.1, big potassium channel alpha subunit, potassium channel, calcium activated large conductance subfamily M alpha, member 1, SLO, maxi-K channel HSLO, BKTM, hSlo, Drosophila slowpoke-like, CADEDS, stretch-activated Kca channel, SAKCA, MaxiK, uncharacterized protein LOC3778, mSLO1, BKCA alpha subunit, IEG16, PNKD3, bA205K10.1, slowpoke homolog, SLO1, LIWAS, k(VCA)alpha, slo homolog
Source: HGNC:6284
Biotype: protein coding gene
Fgfr3
(Mus musculus)Gene
Name: fibroblast growth factor receptor 3
Synonyms: sam3, HBGFR, Fgfr-3
Source: MGI:95524
Biotype: protein coding gene
Calb1
(Mus musculus)Gene
Name: calbindin 1
Synonyms: calbindin, calbindin-D (28k), Calb-1, CaBP28K, Brain-2, Calb, calbindin-D28K, CalbindinD28K, CB
Source: MGI:88248
Biotype: protein coding gene
Wnt3a
(Mus musculus)Gene
Name: wingless-type MMTV integration site family, member 3A
Synonyms: vestigial tail, Wnt-3a, vt
Source: MGI:98956
Biotype: protein coding gene
FGFR2
(Homo sapiens)Gene
Name: fibroblast growth factor receptor 2
Synonyms: FLJ98662, fibroblast growth factor receptor 2 Ksam IV secreted isoform, K-SAM, KGFR, FGFR-2, CFD1, keratinocyte growth factor receptor, BBDS, BEK fibroblast growth factor receptor, ECT1, bacteria-expressed kinase, TK25, CD332, FGF receptor, fibroblast growth factor receptor 2 isoform IgIIIc isoform, JWS, fibroblast growth factor receptor 2 isoform IgIIIb isoform, BEK, hydroxyaryl-protein kinase, BFR-1, protein tyrosine kinase, receptor like 14, CEK3, soluble FGFR4 variant 4, TK14, FGFR2-AHCYL1 fusion kinase protein, fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome)
Source: HGNC:3689
Biotype: protein coding gene
NOTCH1
(Homo sapiens)Gene
Name: notch receptor 1
Synonyms: notch 1, translocation-associated notch protein TAN-1, TAN1, neurogenic locus notch homolog protein 1, notch gene homolog 1, (drosophila), hN1, Notch homolog 1, translocation-associated, AOVD1, AOS5
Source: HGNC:7881
Biotype: protein coding gene
IFI16
(Homo sapiens)Gene
Name: interferon gamma inducible protein 16
Synonyms: interferon-inducible myeloid differentiation transcriptional activator, IFNGIP1, IFI16 beta isoform, PYHIN2, interferon, gamma-inducible protein 16, MGC9466, gamma-interferon-inducible protein 16, ifi-16, interferon-gamma induced protein IFI 16
Source: HGNC:5395
Biotype: protein coding gene
FGF8
(Homo sapiens)Gene
Name: fibroblast growth factor 8
Synonyms: KAL6, androgen-induced growth factor, fibroblast growth factor 8 (androgen-induced), HBGF-8, HH6, heparin-binding growth factor 8, AIGF, MGC149376, FGF-8
Source: HGNC:3686
Biotype: protein coding gene
KCNQ1
(Homo sapiens)Gene
Name: potassium voltage-gated channel subfamily Q member 1
Synonyms: LQT1, potassium voltage-gated channel, KQT-like subfamily, member 1, slow delayed rectifier channel subunit, kidney and cardiac voltage dependend K+ channel, Kv1.9, FLJ26167, potassium voltage-gated channel subfamily KQT member 1, KQT-like 1, KCNA8, LQT, KCNA9, RWS, potassium channel, voltage gated KQT-like subfamily Q, member 1, IKs producing slow voltage-gated potassium channel subunit alpha KvLQT1, KVLQT1, Kv7.1, ATFB1, WRS, SQT2, JLNS1, voltage-gated potassium channel subunit Kv7.1, ATFB3
Source: HGNC:6294
Biotype: protein coding gene
Gata3
(Mus musculus)Gene
Name: GATA binding protein 3
Synonyms: juvenile alopecia, jal, Gata-3
Source: MGI:95663
Biotype: protein coding gene
Tbx3
(Mus musculus)Gene
Name: T-box 3
Synonyms: DNA segment, Chr 5, ERATO Doi 189, expressed, D5Ertd189e
Source: MGI:98495
Biotype: protein coding gene
sox9b
(Danio rerio)Gene
Name: SRY-box transcription factor 9b
Synonyms: fb18d01, wu:fb18d01
Source: ZFIN:ZDB-GENE-001103-2
Biotype: protein coding gene
Bcr
(Mus musculus)Gene
Name: BCR activator of RhoGEF and GTPase
Synonyms: 5133400C09Rik, RIKEN cDNA 5133400C09 gene, AI853148, expressed sequence AI853148, mKIAA3017, expressed sequence AI561783, breakpoint cluster region, AI561783
Source: MGI:88141
Biotype: protein coding gene
Sox2
(Mus musculus)Gene
Name: SRY (sex determining region Y)-box 2
Synonyms: RGD1565646, yellow submarine, Sox-2, ysb, light coat and circling, lcc
Source: MGI:98364
Biotype: protein coding gene
Myo7a
(Mus musculus)Gene
Name: myosin VIIA
Synonyms: Myo7, nmf371, shaker 1, Hdb, headbanger, neuroscience mutagenesis facility, 371, myosin VII, sh-1, sh1, polka, USH1B
Source: MGI:104510
Biotype: protein coding gene
Tshr
(Rattus norvegicus)Gene
Name: thyroid stimulating hormone receptor
Synonyms: thyrotropin receptor, TSH-R, thyroid stimulating hormone, receptor, TSHRA, thyroid-stimulating hormone receptor
Source: RGD:3911
Biotype: protein coding gene
Fgfr2
(Mus musculus)Gene
Name: fibroblast growth factor receptor 2
Synonyms: Fgfr7, AU043015, KGFRTr, seminal vesicle shape, fibroblast growth factor receptor 7, Bek, KGFR, AW556123, svs, Fgfr2b, bacterially expressed kinase, Fgfr-7, Fgfr-2, expressed sequence AW556123, expressed sequence AU043015
Source: MGI:95523
Biotype: protein coding gene
Ntn1
(Mus musculus)Gene
Name: netrin 1
Synonyms: Netrin-1, expressed sequence AI561871, BC019633, netrin-1, AI561871, cDNA sequence BC019633
Source: MGI:105088
Biotype: protein coding gene
Epha4
(Mus musculus)Gene
Name: Eph receptor A4
Synonyms: AI385584, RGD1560587, Hek8, 2900005C20Rik, rb, Cek8, expressed sequence AI385584, RIKEN cDNA 2900005C20 gene, segmentation receptor tyrosine kinase, Tyro1, rabbit, Sek, Sek1
Source: MGI:98277
Biotype: protein coding gene
H2-DMa
(Mus musculus)Gene
Name: histocompatibility 2, class II, locus DMa
Synonyms: H2-M alpha, RT1.DMa, RT1.Ma, H2-Ma, DMA1, H-2Ma, histocompatibility 2, class II, locus Ma
Source: MGI:95921
Biotype: protein coding gene
Ankrd24
(Mus musculus)Gene
Name: ankyrin repeat domain 24
Synonyms: DNA segment, Chr 10, Burmeister 2, expressed, 5730519E19Rik, RIKEN cDNA 4631433D01 gene, 4631433D01Rik, RIKEN cDNA 5730519E19 gene, D10Bur2e
Source: MGI:1890394
Biotype: protein coding gene
Tprn
(Mus musculus)Gene
Name: taperin
Synonyms: C430004E15Rik, C87750, expressed sequence C87750, RIKEN cDNA C430004E15 gene
Source: MGI:2139535
Biotype: protein coding gene
Sod1
(Mus musculus)Gene
Name: superoxide dismutase 1, soluble
Synonyms: RIKEN cDNA B430204E11 gene, CuZnSOD, B430204E11Rik, Cu/Zn-SOD, Cu(2+)-Zn2+ superoxide dismutase, Ipo-1, indophenol oxidase, Sod-1, Ipo1, SODC
Source: MGI:98351
Biotype: protein coding gene
Gli3
(Mus musculus)Gene
Name: GLI-Kruppel family member GLI3
Synonyms: add, anterior digit pattern deformity, expressed sequence AI854843, extra toes, brachyphalangy, polydactyly Nagoya, AU023367, expressed sequence AU023367, Pdn, Bph, Xt, AI854843
Source: MGI:95729
Biotype: protein coding gene
SLITRK6
(Homo sapiens)Gene
Name: SLIT and NTRK like family member 6
Synonyms: 4832410J21Rik, SLIT and NTRK-like protein 6, DFNMYP, MGC119595, slit and trk like gene 6, MGC119597, MGC119596, SLIT and NTRK-like family, member 6
Source: HGNC:23503
Biotype: protein coding gene
Bmp2
(Mus musculus)Gene
Name: bone morphogenetic protein 2
Synonyms: AI467020, bone morphogenetic protein 2a, Bmp2a, expressed sequence AI467020
Source: MGI:88177
Biotype: protein coding gene
Whrn
(Mus musculus)Gene
Name: whirlin
Synonyms: whirler, AW742671, expressed sequence AW742671, Cip98, mKIAA1526, Dfnb31, wi, expressed sequence AW122018, RIKEN cDNA C430046P22 gene, RIKEN cDNA 1110035G07 gene, 1110035G07Rik, C430046P22Rik, AW122018, Ush2d
Source: MGI:2682003
Biotype: protein coding gene
SHH
(Homo sapiens)Gene
Name: sonic hedgehog signaling molecule
Synonyms: HLP3, HPE3, sonic hedgehog, TPT, ShhNC, sonic hedgehog homolog, HHG1, MCOPCB5, SMMCI, sonic hedgehog protein, shh unprocessed N-terminal signaling and C-terminal autoprocessing domains, TPTPS
Source: HGNC:10848
Biotype: protein coding gene
Lhx3
(Mus musculus)Gene
Name: LIM homeobox protein 3
Synonyms: Lim3, mLim-3, P-LIM
Source: MGI:102673
Biotype: protein coding gene
SOX9
(Homo sapiens)Gene
Name: SRY-box transcription factor 9
Synonyms: SRXY10, SRY box 9, transcription factor SOX-9, CMPD1, CMD1, SRA1, SRXX2, SRY (sex determining region Y)-box9, SRY-related HMG-box, gene 9, SRY (sex-determining region Y)-box 9 protein, SRY-box 9
Source: HGNC:11204
Biotype: protein coding gene
BDNF
(Homo sapiens)Gene
Name: brain derived neurotrophic factor
Synonyms: BULN2, abrineurin, MGC34632, brain-derived neurotrophic factor, neurotrophin, ANON2
Source: HGNC:1033
Biotype: protein coding gene
Cdh1
(Mus musculus)Gene
Name: cadherin 1
Synonyms: Ecad, uvomorulin, expressed sequence AA960649, UM, Um, L-CAM, E-cad, AA960649, E-cadherin
Source: MGI:88354
Biotype: protein coding gene