Gene

Cep162

Species
Drosophila melanogaster
Symbol
Cep162
Name
Not Available
Synonyms
  • CG15770
  • CG4064
Biotype
protein coding gene
Automated Description
Predicted to be involved in cilium assembly. Predicted to be active in axonemal microtubule and centriole. Is expressed in central brain primordium; embryonic brain; larval ventral nerve cord; organism; and ventral nerve cord primordium. Orthologous to human CEP162 (centrosomal protein 162).
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR34031
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensCEP1622 of 9YesYes   
Mus musculusCep1623 of 9YesYes   
Rattus norvegicusCep1622 of 9YesYes   
Danio reriocep1622 of 10YesYes  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
Phenotype Term
Annotation details
References
abnormal adult locomotory behavior
abnormal behavior | larval stage
abnormal smell perception
adult antennal sense organ | P-stage
centriole | spermatogenesis
cilium
decreased rate of adult locomotory behavior
fertile
microtubule | spermatogenesis
mitochondrial derivative | decreased number | spermatogenesis
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Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
5.766M5.768M5.770M5.772M5.774M5.776M5.778M5.780M5.782M5.784M5.786M5.788M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
Cep162CR02710-TG4.1-X
  • Cep162[CR02710-TG4.1-X]
  • CG42699[CR02710-TG4.1-X]
allele
Cep162BG02427
  • Cep162[BG02427]
  • CG42699[BG02427]
allele
Yes
Cep162CR01543-TG4.0
  • Cep162[CR01543-TG4.0]
  • CG42699[CR01543-TG4.0]
allele
Cep162CR02692-TG4.1-X
  • Cep162[CR02692-TG4.1-X]
  • CG42699[CR02692-TG4.1-X]
allele
Cep162d04424
  • Cep162[d04424]
  • CG4064[d04424]
allele with one associated variant
insertion
  • coding sequence variant
Cep162d11614
  • Cep162[d11614]
  • CG42699[d11614]
allele with one associated variant
insertion
  • intron variant
Cep1621
  • cep162[1]
  • Cep162[1]
allele with one associated variant
deletion
  • frameshift variant
Yes
Cep162HP10141
  • Cep162[HP10141]
  • CG42699[HP10141]
allele with one associated variant
insertion
  • intron variant
Cep162e00457
  • Cep162[e00457]
  • CG4064[e00457]
allele with one associated variant
insertion
  • coding sequence variant
Yes
Cep162EP390
  • Cep162[EP390]
  • CG15770[EP390]
allele with one associated variant
insertion
  • 5 prime UTR variant
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Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterCep162C.GFP
Drosophila melanogasterCep162GD11207
  • UASt
Drosophila melanogasterCep162GD9115
  • UASt
Drosophila melanogasterCep162GFP
Drosophila melanogasterCep162HMS01065
  • UAS
Drosophila melanogasterCep162KK111863
  • UASt
Drosophila melanogasterCep162N.GFP
Drosophila melanogasterCep162NIG.15770R
  • UASt
Drosophila melanogasterCep162UAS.ORF.Tag:HA
  • UASt
Drosophila melanogasterCep162UAS.ORF
  • UASt
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Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
5.766M5.768M5.770M5.772M5.774M5.776M5.778M5.780M5.782M5.784M5.786M5.788MCG42699-RC (CG42699)CG3097-RA (CG3097)CG42264-RA (CG42264)CG42264-RB (CG42264)CG3108-RA (CG3108)mir-4963-RA (mir-4963)mir-4963-RB (mir-4963)mir-4963-RM (mir-4963)CG15767-RA (CG15767)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

6 interactor genes based on 8 annotations
Cep162 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
Cep290Drosophila melanogaster
protein
  • two hybrid
PMID:38442096
protein
ctpDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
dilaDrosophila melanogaster
protein
  • pull down
PMID:38442096
protein
dilaDrosophila melanogaster
protein
  • two hybrid
PMID:38442096
protein
MerDrosophila melanogaster
protein
  • two hybrid
PMID:15710747
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Genetic Interactions

Cep162 role
Cep162 genetic perturbation
Interactor gene
Interactor species
Interactor role
Interactor genetic perturbation
Interaction type
Phenotype or trait
Source
Reference
enhanced gene
CbyDrosophila melanogaster
enhancer gene
genetic enhancement
    PMID:38442096
    enhancer gene
    CbyDrosophila melanogaster
    enhanced gene
    genetic enhancement
      PMID:38442096
      enhanced gene
      Fam92Drosophila melanogaster
      enhancer gene
      genetic enhancement
        PMID:38442096
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