Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | NKX2-2 | 4 of 9 | Yes | Yes | ☑ ☑☐☐☐☑☑☐☐ |
Mus musculus | Nkx2-2 | 4 of 9 | Yes | Yes | ☑ ☑☐☐☐☑☑☐☐ |
Rattus norvegicus | Nkx2-2 | 5 of 9 | Yes | Yes | ☑ ☑☐☐☐☑☑☑☐ |
Xenopus tropicalis | nkx2-2 | 5 of 9 | Yes | Yes | ☐ ☑☐☐☑☑☑☑☐ |
Danio rerio | nkx2.2b | 5 of 10 | Yes | Yes | ☑ ☑☐☐☐☑☑☑☐ ☐ |
Danio rerio | nkx2.2a | 5 of 10 | Yes | Yes | ☑ ☑☐☐☐☑☑☑☐ ☐ |
Caenorhabditis elegans | ceh-22 | 3 of 9 | Yes | Yes | ☐ ☑☐☐☑☐☑☐☐ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
slou | 1 | 627 | 33 | 25 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
scro | 2 | 417 | 45 | 33 | 5 of 8 | ☑ ☐☐☐☑☑☑☑ |
HGTX | 3 | 632 | 31 | 21 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
NK7.1 | 4 | 601 | 32 | 21 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
tin | 5 | 460 | 40 | 28 | 3 of 8 | ☐ ☐☐☑☐☑☑☐ |
ems | 6 | 543 | 34 | 24 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
bap | 7 | 253 | 39 | 30 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
Phenotype Term | Annotation details | References |
---|---|---|
abnormal neuroanatomy | ||
abnormal neuroanatomy | embryonic stage | ||
central nervous system | ||
Dd1 neuroblast | embryonic stage 11 | ||
Dd1 neuroblast | embryonic stage 9 | ||
Dd2 neuroblast | embryonic stage 11 | ||
dMP2 neuron | ||
Dv1 neuroblast | embryonic stage 11 | ||
Dv2 neuroblast | embryonic stage 11 | ||
Dv2 neuroblast | embryonic stage 9 |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
vndD38 |
| allele | Yes | ||||
vnd22 |
| allele | |||||
vnd15 |
| allele | |||||
vnd18 |
| allele | |||||
vnd5 |
| allele | Yes | ||||
vnd9 |
| allele | |||||
vndS1 |
| allele | Yes | ||||
vnd30 |
| allele | |||||
vnd12 |
| allele | |||||
vnd21 |
| allele |
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Drosophila melanogaster | vnd1-543.G4DBD.Kr | ||||||
Drosophila melanogaster | vnd1-543ΔVEH1.G4DBD.Kr | ||||||
Drosophila melanogaster | vnd5vnd.hp43.κIg.Tag:HA |
| |||||
Drosophila melanogaster | vndFRT.Kr | ||||||
Drosophila melanogaster | vndGD4406 |
| |||||
Drosophila melanogaster | vndGFP.FPTB |
| |||||
Drosophila melanogaster | vndHD_CFD00967 |
| |||||
Drosophila melanogaster | vndHMC03405 |
| |||||
Drosophila melanogaster | vndJF02816 |
| |||||
Drosophila melanogaster | vndKK100622 |
|
vnd molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | abd-A | Drosophila melanogaster | protein |
| PMID:30247122 | |
protein | Ada2b | Drosophila melanogaster | protein |
| PMID:21764853 | |
protein | Alh | Drosophila melanogaster | protein |
| PMID:30995488 | |
protein | ArfGAP1 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | BicC | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG7054 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG10265 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG10654 | Drosophila melanogaster | protein |
| PMID:30995488 | |
protein | CG11294 | Drosophila melanogaster | protein |
| PMID:30995488 | |
protein | CG31642 | Drosophila melanogaster | protein |
| PMID:30995488 |