Gene

ptch2.L

Species
Xenopus laevis
Symbol
ptch2.L
Name
patched 2
Synonyms
  • patched 2
  • patched-2
Biotype
gene
Automated Description
Predicted to enable hedgehog receptor activity. Predicted to be located in membrane. Is expressed in anatomical system; appendage; ectoderm; mesenchyme; and pharyngeal arch. Human ortholog(s) of this gene implicated in basal cell carcinoma and medulloblastoma. Orthologous to human PTCH2 (patched 2).
XBXL Description
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensPTCH21 of 1YesYes           
Xenopus tropicalisptch21 of 1YesYes           
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XL9.2
Viewer Help
80.420M80.425M80.430M80.435M80.440M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available