Gene

ssuh2.3

Species
Danio rerio
Symbol
ssuh2.3
Name
ssu-2 homolog, tandem duplicate 3
Synonyms
  • zgc:175175
Biotype
protein coding gene
Automated Description
Orthologous to human SSUH2 (ssu-2 homolog).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR15852
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSSUH22 of 10YesNo  
Mus musculusSsu22 of 10YesNo  
Xenopus tropicalisssuh25 of 9YesYes   
Xenopus tropicalisXB59564305 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
ssuh2.4123266565 of 8  
ssuh2.2217876675 of 8  
ssuh2rs1320255465 of 8  
ssuh2.1420753392 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
Mus musculusSsu2
is implicated indentin dysplasia
  • TAS
    Showing 1 - 1 of 1 rows
    per page

    Alleles and Variants

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    30.992M30.993M30.994M30.995M30.996M30.997M30.998M30.999M
    Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    sa9481allele with one associated variant
    point mutation
    • stop gained
    sa19303allele with one associated variant
    point mutation
    • stop gained
    sa17965allele with one associated variant
    point mutation
    • stop gained
    Showing 1 - 3 of 3 rows
    per page

    Transgenic Alleles

    No data available

    Models

    No data available

    Sequence Feature Viewer

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    30.992M30.993M30.994M30.995M30.996M30.997M30.998M30.999Mssuh2.3-201 (ssuh2.3)ssuh2.3-202 (ssuh2.3)

    Sequence Details

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    Expression

    Primary Sources
    None
    Other Sources
    Must provide at least one subject
    Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

    Molecular Interactions

    No data available

    Genetic Interactions

    No data available