Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | ABCD3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Mus musculus | Abcd3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Rattus norvegicus | Abcd3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Xenopus tropicalis | abcd3 | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
Danio rerio | abcd3a | 9 of 10 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ ☐ |
Danio rerio | abcd3b | 9 of 10 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ ☐ |
Caenorhabditis elegans | pmp-1 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Caenorhabditis elegans | pmp-2 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Saccharomyces cerevisiae | PXA1 | 5 of 9 | Yes | No | ☐ ☐☑☑☑☑☐☐☑ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
Abcd1 | 1 | 698 | 55 | 35 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Abcd3EY09231 |
| allele | |||||
Abcd3KG08105 |
| allele with one associated variant | insertion
| ||||
NC_004354.4:g.19756386A>T | variant | SNP
| |||||
NC_004354.4:g.19755586T>C | variant | SNP
| |||||
NC_004354.4:g.19755768G>A | variant | SNP
| |||||
NC_004354.4:g.19754032A>G | variant | SNP
| |||||
NC_004354.4:g.19754090A>G | variant | SNP
| |||||
NC_004354.4:g.19755165T>C | variant | SNP
| |||||
NC_004354.4:g.19753365G>T | variant | SNP
| |||||
NC_004354.4:g.19755770G>A | variant | SNP
|
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Drosophila melanogaster | Abcd3GD3688 |
| |||||
Drosophila melanogaster | Abcd3HMS01338 |
| |||||
Drosophila melanogaster | Abcd3KK101428 |
| |||||
Drosophila melanogaster | Abcd3TKO.GS02476 | ||||||
Drosophila melanogaster | Abcd3TOE.GS03151 | ||||||
Drosophila melanogaster | Abcd3UAS.ECFP |
|
|
Abcd3 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | C1GalTA | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG1105 | Drosophila melanogaster | protein |
| PMID:38270169 | |
protein | CG5225 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG9547 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG15141 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | eyg | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | gcm2 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | Gtpbp2 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | kermit | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | me31B | Drosophila melanogaster | protein |
| PMID:35020877 |