Gene

bdg

Species
Drosophila melanogaster
Symbol
bdg
Name
bedraggled
Synonyms
  • CG8291
Biotype
protein coding gene
Automated Description
Predicted to enable L-amino acid transmembrane transporter activity; amino acid:sodium symporter activity; and neurotransmitter:sodium symporter activity. Involved in R3/R4 cell fate commitment. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including anterior-posterior subdivision of organism; imaginal disc; larval central nervous system; larval ventral nerve cord; and mesectoderm anlage.
FB Description
bedraggled (bdg) encodes a putative transporter involved in the fate commitment of the R3/R4 pair of photoreceptor cells.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11616
Stringency:
Additional filters to further constrain the results:
No ortholog matching your filter. Please try a less stringent filter.
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
ine1100936202 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
Phenotype Term
Annotation details
References
abnormal locomotor behavior | adult stage
abnormal planar polarity
antennal disc
eye disc
eye photoreceptor cell
eye photoreceptor cell | somatic clone
flightless
lethal | recessive
ommatidium
ommatidium | somatic clone
Showing 1 - 10 of 11 rows
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Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
15.924M15.925M15.926M15.927M15.928M15.929M15.930M15.931M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
bdgGMREP
  • bdg[GMREP]
allele
Yes
bdg164
  • bdg[164]
allele
Yes
bdg36
  • bdg[36]
allele
Yes
bdg90
  • bdg[90]
allele
Yes
bdgMI08844
  • bdg[MI08844]
allele with one associated variant
insertion
  • intron variant
bdgf07025
  • bdg[f07025]
  • CG8291[f07025]
allele with one associated variant
insertion
  • intron variant
bdgk08407
  • bdg[k08407]
allele with one associated variant
insertion
  • 5 prime UTR variant
bdgSE160
  • bdg[SE160]
allele with one associated variant
insertion
  • intron variant
bdgKG07083
  • bdg[KG07083]
  • CG8291[KG07083]
allele with one associated variant
insertion
  • intron variant
bdge04631
  • bdg[e04631]
  • CG8291[e04631]
allele with one associated variant
insertion
  • intron variant
Showing 1 - 10 of 332 rows
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Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterDiap2+t7.4Wt
Drosophila melanogasterDiap27.4C472Y
Drosophila melanogasterbdgGD2018
  • UASt
Drosophila melanogasterbdgKK105846
  • UASt
Drosophila melanogasterbdgTKO.GS04954
Drosophila melanogasterbdgUAS.cRa
  • UASt
Drosophila melanogasterbdgt7.4
Drosophila melanogasterbugt7.4
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Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
15.924M15.925M15.926M15.927M15.928M15.929M15.930M15.931Mbdg-RA (bdg)bdg-RB (bdg)bdg-RC (bdg)bdg-RD (bdg)

Sequence Details

Loading...

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

26 interactor genes based on 33 annotations
bdg molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
AIMP2Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
Ald1Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG5762Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG15347Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG15529Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG17325Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG31797Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG32706Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
dgt2Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
DIP-ιDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
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Genetic Interactions

bdg role
bdg genetic perturbation
Interactor gene
Interactor species
Interactor role
Interactor genetic perturbation
Interaction type
Phenotype or trait
Source
Reference
suppressed gene
dgoDrosophila melanogaster
suppressor gene
genetic suppression
    PMID:17890365
    enhancer gene
    dgoDrosophila melanogaster
    enhanced gene
    genetic enhancement
      PMID:17890365
      suppressor gene
      dgoDrosophila melanogaster
      suppressed gene
      genetic suppression
        PMID:17890365
        suppressed gene
        dshDrosophila melanogaster
        suppressor gene
        genetic suppression
          PMID:17890365
          enhancer gene
          dshDrosophila melanogaster
          enhanced gene
          genetic enhancement
            PMID:17890365
            enhancer gene
            fzDrosophila melanogaster
            enhanced gene
            genetic enhancement
              PMID:17890365
              suppressed gene
              pkDrosophila melanogaster
              suppressor gene
              genetic suppression
                PMID:17890365
                suppressed gene
                stanDrosophila melanogaster
                suppressor gene
                genetic suppression
                  PMID:17890365
                  enhancer gene
                  stanDrosophila melanogaster
                  enhanced gene
                  genetic enhancement
                    PMID:17890365
                    suppressor gene
                    stanDrosophila melanogaster
                    suppressed gene
                    genetic suppression
                      PMID:17890365
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