Gene

CG6984

Species
Drosophila melanogaster
Symbol
CG6984
Name
Not Available
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable enoyl-CoA hydratase activity. Predicted to be involved in fatty acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including adult heart; embryonic hindgut; and embryonic/larval midgut primordium. Orthologous to human ECHDC3 (enoyl-CoA hydratase domain containing 3).
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR43602
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensECHDC39 of 9YesYes   
Mus musculusEchdc39 of 9YesYes   
Rattus norvegicusEchdc39 of 9YesYes   
Danio rerioechdc39 of 10YesYes  
Caenorhabditis elegansech-29 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Echs1129745282 of 8  
CG8778230343272 of 8  
CG5611330041222 of 8  
Dci427144242 of 8  
Srlp527541232 of 8  
Hibch626343232 of 8  
CG9577727141232 of 8  
CG4598825442242 of 8  
CG4592925343202 of 8  
CG45941020749242 of 8  
HIPP11123938232 of 8  
CG14787128136282 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
17.0920M17.0921M17.0922M17.0923M17.0924M17.0925M17.0926M17.0927M17.0928M17.0929M17.0930M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
CG6984CR71106-KO-kG4
  • CG6984[CR71106-KO-kG4]
allele
CG69844076-G4
  • CG6984[4076-G4]
allele with one associated variant
insertion
  • coding sequence variant
NT_033778.4:g.17092395G>Cvariant
SNP
  • missense variant
NT_033778.4:g.17093015A>Gvariant
SNP
  • 3 prime UTR variant
NT_033778.4:g.17092438G>Avariant
SNP
  • synonymous variant
NT_033778.4:g.17092597G>Cvariant
SNP
  • synonymous variant
NT_033778.4:g.17092937A>Gvariant
SNP
  • 3 prime UTR variant
NT_033778.4:g.17092940A>Gvariant
SNP
  • 3 prime UTR variant
NT_033778.4:g.17092052T>Avariant
SNP
  • missense variant
NT_033778.4:g.17092180A>Gvariant
SNP
  • synonymous variant
Showing 1 - 10 of 54 rows
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Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterCG6984GD10761
  • UASt
Drosophila melanogasterCG6984HM04063
  • UAS
Drosophila melanogasterCG6984KK101461
  • UASt
Showing 1 - 3 of 3 rows
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Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
17.0920M17.0921M17.0922M17.0923M17.0924M17.0925M17.0926M17.0927M17.0928M17.0929M17.0930M

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

2 interactor genes based on 2 annotations
CG6984 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
SmnDrosophila melanogaster
protein
  • experimental knowledge based
PMID:22036573
Showing 1 - 1 of 1 rows
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Genetic Interactions

CG6984 role
CG6984 genetic perturbation
Interactor gene
Interactor species
Interactor role
Interactor genetic perturbation
Interaction type
Phenotype or trait
Source
Reference
enhancer gene
Ras85DDrosophila melanogaster
enhanced gene
genetic enhancement
    PMID:22028469
    Showing 1 - 1 of 1 rows
    per page