Version: 8.0.0
Date: Tue Jan 28 2025
Gabarapl1
Mus musculusMGI:1914980
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

Gabarapl1

Species
Mus musculus
Symbol
Gabarapl1
Name
GABA type A receptor associated protein like 1
Synonyms
  • 3110025G09Rik
  • 9130422N19Rik
Biotype
protein coding gene
Automated Description
Predicted to enable several functions, including Tat protein binding activity; phosphatidylethanolamine binding activity; and ubiquitin protein ligase binding activity. Involved in glycophagy. Predicted to be located in autophagosome; cell body; and dendrite. Predicted to be active in autophagosome membrane. Predicted to colocalize with mitochondrion. Is expressed in several structures, including adipose tissue; cerebral cortex; ganglia; sensory organ; and urinary system. Orthologous to human GABARAPL1 (GABA type A receptor associated protein like 1).
MGI Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10969
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Gabarap111695877 of 9☑☐☑☐☑☑☑☑☑ 
Gabarapl2211676617 of 9☑☐☑☐☑☑☑☑☑ 
Map1lc3a311760343 of 9☑☐☐☐☐☐☑☑☐ 
Map1lc3b414946252 of 9☐☐☐☐☐☐☑☑☐ 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
Phenotype Term
Annotation details
References
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    Disease Associations

    Cases where the expected disease association was NOT found
    Must provide at least one subject
    Cell color indicative of annotation volume
    No data available

    Alleles and Variants

    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
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      Transgenic Alleles

      No data available

      Models

      No data available

      Sequence Feature Viewer

      Genome location
      Assembly version
      GRCm39
      Viewer Help
      Data currently unavailable; sequence viewer under construction

      Sequence Details

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      Expression

      Primary Sources
      Other Sources
      Must provide at least one subject
      Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

      Molecular Interactions

      Gabarapl1 molecule type
      Interactor gene
      Interactor species
      Interactor molecule type
      Detection methods
      Source
      Reference
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        Genetic Interactions

        Gabarapl1 role
        Gabarapl1 genetic perturbation
        Interactor gene
        Interactor species
        Interactor role
        Interactor genetic perturbation
        Interaction type
        Phenotype or trait
        Source
        Reference
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