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Date: Fri Dec 13 2024
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1700016L21Rik
Mus musculus
MGI:1919458
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
1700016L21Rik
Species
Mus musculus
Symbol
1700016L21Rik
Name
RIKEN cDNA 1700016L21 gene
Synonyms
DCKO
Jr3
Biotype
lncRNA gene
Automated Description
Not Available
MGI Description
Not Available
Cross References
ENSEMBL:ENSMUSG00000101483
NCBI_Gene:72208
Additional Information
Literature
Orthology
Gene tree
Not Available
No data available
Links to orthology data in JBrowse by filter level:
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,
Moderate
,
No filter
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Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
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Species
All vertebrates
All invertebrates
Homo sapiens
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
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Show functions with at least one experimental evidence
No function available for that gene
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
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Species
All vertebrates
All invertebrates
Homo sapiens
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
No data available
Alleles and Variants
No mapped variant information available
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Associated Human Disease
Variant
Variant type
Molecular consequence
Allele/Variant Symbol
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Allele Synonyms
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Category
allele
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Variant
Variant type
unreported
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Molecular consequence
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Has Disease Annotations
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Has Phenotype Annotations
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No
Clear
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
1700016L21Rik
Tg(Itgax-DTR/EGFP)57Lan
CD11c-DTR
Show All 14
allele
Yes
Showing 1 - 1 of 1 rows
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Download
View detailed Alleles/Variants information
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
Model name
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Experimental condition
Associated Human Diseases
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Associated Phenotypes
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Modifier
Source
Clear
Apply
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] B6.FVB-1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
abnormal circulating cytokine level
abnormal susceptibility to infection
Show All 8
MGI
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] B6.FVB-1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/J
abnormal NK T cell physiology
abnormal NK cell physiology
Show All 11
MGI
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] C.FVB-1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
abnormal CD8-positive, alpha-beta T cell differentiation
abnormal T cell activation
Show All 7
MGI
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] C.FVB-1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/J
abnormal NK cell physiology
decreased circulating interferon-gamma level
Show All 5
MGI
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] involves: C57BL/6 * FVB/N
abnormal alveolar macrophage morphology
decreased dendritic cell number
Show All 4
MGI
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] involves: FVB/N
abnormal response to infection
decreased T cell number
Show All 8
MGI
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] NOD.FVB-1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/Jdk
abnormal professional antigen presenting cell physiology
cachexia
Show All 10
MGI
Siglec1
tm1(HBEGF)Mtka
/Siglec1
tm1(HBEGF)Mtka
1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/? [background:] involves: 129S1/Sv * 129X1/SvJ * FVB/N
abnormal dendritic cell physiology
abnormal immune system physiology
Show All 6
MGI
Tg(Ins2-TFRC/OVA)296Wehi/0 1700016L21Rik
Tg(Itgax-HBEGF/EGFP)57Lan
/0 [background:] involves: C57BL/6 * FVB
decreased T cell proliferation
MGI
Showing 1 - 9 of 9 rows
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1
Sequence Feature Viewer
Genome location
Chr1:80423649...80453377
+ (29.73 kb)
Assembly version
GRCm39
Viewer Help
80.425M
80.430M
80.435M
80.440M
80.445M
80.450M
Sequence Details
Transcript:
Mode:
Genomic
Genomic +/- 500bp up+down stream
Expression
Primary Sources
None
Other Sources
GEO
Single Cell Expression Atlas
Expression Atlas
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
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