Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | DEK | 10 of 10 | Yes | Yes | ☑☑☑☑☑☑☑☑☑☑ |
Rattus norvegicus | Dek | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Xenopus tropicalis | dek | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
Danio rerio | dek | 10 of 10 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ ☑ |
Drosophila melanogaster | Dek | 7 of 9 | Yes | Yes | ☑ ☑☐☐☑☑☑☑☑ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|
Phenotype Term | Annotation details | References |
---|---|---|
abnormal tongue squamous epithelium morphology | ||
decreased incidence of tumors by chemical induction | ||
esophagus hyperplasia | ||
increased incidence of tumors by chemical induction | ||
increased squamous cell carcinoma incidence | ||
premature death |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Dekem1Gpt |
| allele | |||||
Dekem3Cya |
| allele | |||||
Dekem2Cya |
| allele | |||||
Dektm1Siwe | allele | Yes | |||||
Dektm1.1Yhou |
| allele | |||||
Dekem1Cya |
| allele | |||||
NC_000079.7:g.47241093G>A | variant | SNP
| |||||
NC_000079.7:g.47241691A>T | variant | SNP
| |||||
NC_000079.7:g.47241848T>A | variant | SNP
| |||||
NC_000079.7:g.47242039G>A | variant | SNP
|
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Mus musculus | Tg(CAG-Dek)#Yhou | ||||||
Mus musculus | Tg(tetO/CMV-Dek,-luc)317Siwe | Yes |
Model name | Experimental condition | Associated Human Diseases | Associated Phenotypes | Modifier | Source |
---|---|---|---|---|---|
Dektm1Siwe/Dektm1Siwe [background:] involves: 129P2/OlaHsd |
| MGI |
Dek molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | Atxn1 | Mus musculus | protein |
| PMID:30457570 | |
protein | Ccnl1 | Mus musculus | protein |
| PMID:32325033 | |
protein | F13b | Mus musculus | protein |
| PMID:32325033 | |
protein | Fbxw7 | Mus musculus | protein |
| PMID:30783098 | |
protein | Gpatch2 | Mus musculus | protein |
| PMID:32325033 | |
protein | Irf2bp2 | Mus musculus | protein |
| PMID:32325033 | |
protein | Macroh2a1 | Mus musculus | protein |
| PMID:32325033 | |
protein | Phf14 | Mus musculus | protein |
| PMID:32325033 | |
protein | Tlx3 | Mus musculus | protein |
| PMID:20211142 | |
protein | Twist1 | Mus musculus | protein |
| PMID:33554859 |