Gene

Elfn1

Species
Rattus norvegicus
Symbol
Elfn1
Name
extracellular leucine-rich repeat and fibronectin type III domain containing 1
Synonyms
  • extracellular leucine-rich repeat and fibronectin type-III domain-containing protein 1
  • leucine rich repeat and fibronectin type III, extracellular 1
Biotype
protein coding gene
Automated Description
Predicted to be involved in synaptic membrane adhesion. Predicted to act upstream of or within several processes, including chemical synaptic transmission; synapse assembly; and visual perception. Predicted to be located in dendrite and excitatory synapse. Predicted to be active in several cellular components, including axon terminus; glutamatergic synapse; and postsynaptic density membrane. Orthologous to human ELFN1 (extracellular leucine rich repeat and fibronectin type III domain containing 1).
RGD Description
Predicted to be involved in synaptic membrane adhesion. Predicted to act upstream of or within synapse assembly; synaptic signaling; and visual perception. Predicted to be located in dendrite and excitatory synapse. Predicted to be active in several cellular components, including axon terminus; glutamatergic synapse; and postsynaptic density membrane. Orthologous to human ELFN1 (extracellular leucine rich repeat and fibronectin type III domain containing 1); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24369
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Elfn2187560483 of 9 
Lrig3293930182 of 9 
Lrig2388528193 of 9 
Lrig1469533212 of 9 
Tril560328192 of 9 
Chadl626737242 of 9 
Cpn2723441242 of 9 
LRRTM1821642262 of 9 
Chad923834212 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
14.67M14.68M14.69M14.70M14.71M14.72M

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available