Gene

Rtn4ip1

Species
Rattus norvegicus
Symbol
Rtn4ip1
Name
reticulon 4 interacting protein 1
Synonyms
  • LOC309912
  • reticulon-4-interacting protein 1, mitochondrial
Biotype
protein coding gene
Automated Description
Predicted to enable NADPH dehydrogenase (quinone) activity. Predicted to be involved in regulation of dendrite development and ubiquinone biosynthetic process. Predicted to be located in mitochondrial outer membrane. Predicted to be active in mitochondrial matrix. Human ortholog(s) of this gene implicated in optic atrophy 10. Orthologous to human RTN4IP1 (reticulon 4 interacting protein 1).
RGD Description
Predicted to enable NADPH dehydrogenase (quinone) activity. Predicted to be involved in regulation of dendrite development and ubiquinone biosynthetic process. Predicted to be located in mitochondrial outer membrane. Predicted to be active in mitochondrial matrix. Human ortholog(s) of this gene implicated in optic atrophy 10. Orthologous to human RTN4IP1 (reticulon 4 interacting protein 1); INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 6-propyl-2-thiouracil; alpha-Zearalanol.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11695
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensRTN4IP19 of 10YesYes  
Mus musculusRtn4ip19 of 9YesYes   
Xenopus tropicalisrtn4ip15 of 9YesYes   
Danio reriortn4ip19 of 9YesYes   
Drosophila melanogasterRtn4ip19 of 9YesYes   
Caenorhabditis elegansrad-88 of 9YesYes   
Saccharomyces cerevisiaeYIM16 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Vat1l139643262 of 9 
Vat1239841242 of 9 
Adh6a342636222 of 9 
Cryz437840252 of 9 
Cryzl2537840252 of 9 
Ptgr3636540242 of 9 
Ptgr1737439242 of 9 
Cryzl1837439242 of 9 
Sord937539212 of 9 
Mecr1036137252 of 9 
Adh61138233222 of 9 
Adh51237834212 of 9 
Adh71339132212 of 9 
Ptgr21422241252 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
47.385M47.390M47.395M47.400M47.405M47.410M47.415M47.420M

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

1 interactor gene based on 1 annotation
Rtn4ip1 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
UbcRattus norvegicus
protein
  • affinity chromatography technology
PMID:22871113
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Genetic Interactions