Gene

Csnk1g1

Species
Rattus norvegicus
Symbol
Csnk1g1
Name
casein kinase 1, gamma 1
Synonyms
  • casein kinase 1 gamma 1
  • casein kinase I
Biotype
protein coding gene
Automated Description
Enables protein serine/threonine kinase activity. Involved in protein autophosphorylation. Predicted to be located in cytosol. Predicted to be active in cytoplasm; nucleus; and plasma membrane. Orthologous to human CSNK1G1 (casein kinase 1 gamma 1).
RGD Description
Enables protein serine/threonine kinase activity. Involved in protein autophosphorylation. Predicted to be located in cytosol. Predicted to be active in cytoplasm; nucleus; and plasma membrane. Orthologous to human CSNK1G1 (casein kinase 1 gamma 1); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; Wnt signaling, canonical pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11909
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensCSNK1G110 of 10YesYes  
Mus musculusCsnk1g19 of 9YesYes   
Xenopus tropicaliscsnk1g13 of 9YesYes   
Xenopus tropicaliscsnk1g23 of 9NoYes   
Danio reriocsnk1g16 of 9YesYes   
Drosophila melanogastergish5 of 9YesNo   
Caenorhabditis eleganscsnk-18 of 9YesNo   
Saccharomyces cerevisiaeYCK17 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Csnk1g3146785777 of 9 
Csnk1g2249674677 of 9 
Csnk1d340065493 of 9 
Csnk1e436269523 of 9 
Csnk1a1535263483 of 9 
Ttbk1645343283 of 9 
Vrk2743738243 of 9 
Ttbk2831851323 of 9 
Vrk1934146283 of 9 
Vrk31026844283 of 9 
Cdc71115644242 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
66.44M66.46M66.48M66.50M66.52M66.54M66.56M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051343.1:g.66456209C>Gvariant
SNP
  • intron variant
NC_051343.1:g.66460385C>Gvariant
SNP
  • intron variant
NC_051343.1:g.66575057T>Cvariant
SNP
  • 3 prime UTR variant
NC_051343.1:g.66460371C>Gvariant
SNP
  • intron variant
NC_051343.1:g.66460373C>Gvariant
SNP
  • intron variant
NC_051343.1:g.66466297A>Cvariant
SNP
  • intron variant
NC_051343.1:g.66472990A>Gvariant
SNP
  • intron variant
NC_051343.1:g.66482821T>Cvariant
SNP
  • intron variant
NC_051343.1:g.66462099G>Tvariant
SNP
  • intron variant
NC_051343.1:g.66463599A>Gvariant
SNP
  • intron variant
Showing 1 - 10 of 228 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
66.44M66.46M66.48M66.50M66.52M66.54M66.56MENSRNOT00000042369.4 (Csnk1g1)ENSRNOT00000090096.2 (Csnk1g1)ENSRNOT00000096791.1 (Csnk1g1)ENSRNOT00000096879.1 (Csnk1g1)ENSRNOT00000116171.1 (Csnk1g1)NM_022288.2 (Csnk1g1)XM_008766332.4 (Csnk1g1)XM_008766334.4 (Csnk1g1)XM_008766335.4 (Csnk1g1)XM_017595886.3 (Csnk1g1)Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.

Sequence Details

Transcript: Mode:

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

1 interactor gene based on 1 annotation
Csnk1g1 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
UbcRattus norvegicus
protein
  • affinity chromatography technology
PMID:22871113
Showing 1 - 1 of 1 rows
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Genetic Interactions

No data available