Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | MAP1LC3A | 10 of 10 | Yes | Yes | ☑☑☑☑☑☑☑☑☑☑ |
Mus musculus | Map1lc3a | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Xenopus tropicalis | map1lc3a | 8 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☐☑ |
Danio rerio | map1lc3a | 8 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☐☑ |
Caenorhabditis elegans | lgg-2 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
Map1lc3b | 1 | 120 | 93 | 82 | 7 of 9 | ☑☐☑☐☑☑☑☑☑ |
Gabarapl2 | 2 | 115 | 67 | 42 | 3 of 9 | ☑☐☐☐☐☐☑☑☐ |
Gabarapl1 | 3 | 117 | 60 | 34 | 3 of 9 | ☑☐☐☐☐☐☑☑☐ |
Gabarapl3 | 4 | 115 | 67 | 42 | 2 of 9 | ☐☐☐☐☐☐☑☑☐ |
Gabarap | 5 | 117 | 59 | 32 | 3 of 9 | ☑☐☐☐☐☐☑☑☐ |
Gabarapl4 | 6 | 115 | 61 | 37 | 2 of 9 | ☐☐☐☐☐☐☑☑☐ |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
NC_051338.1:g.143783044G>C | variant | SNP
| |||||
NC_051338.1:g.143784670C>A | variant | SNP
| |||||
NC_051338.1:g.143783728C>T | variant | SNP
| |||||
NC_051338.1:g.143784669G>A | variant | SNP
| |||||
NC_051338.1:g.143784561C>T | variant | SNP
|
Map1lc3a molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | AIM2 | Homo sapiens | protein |
| PMID:22286270 | |
protein | LAMP1 | Homo sapiens | protein |
| PMID:20010805 | |
protein | PYCARD | Homo sapiens | protein |
| PMID:22286270 | |
protein | TP53INP2 | Homo sapiens | protein |
| PMID:20010805 | |
protein | TP53INP2 | Homo sapiens | protein |
| PMID:20010805 | |
protein | Trp53inp2 | Mus musculus | protein |
| PMID:20010805 | |
protein | Tuba1a | Rattus norvegicus | protein |
| PMID:7908909 |