Gene

si:dkey-26m3.3

Species
Danio rerio
Symbol
si:dkey-26m3.3
Name
si:dkey-26m3.3
Synonyms
None
Biotype
protein coding gene
Automated Description
Human ortholog(s) of this gene implicated in CINCA Syndrome; Muckle-Wells syndrome; autosomal dominant nonsyndromic deafness 34; familial cold autoinflammatory syndrome (multiple); and urticaria. Orthologous to several human genes including NLRP12 (NLR family pyrin domain containing 12); NLRP13 (NLR family pyrin domain containing 13); and NLRP14 (NLR family pyrin domain containing 14).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24106
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensNLRP45 of 10YesNo  
Homo sapiensNLRP95 of 10YesNo  
Homo sapiensNLRP35 of 10YesNo  
Homo sapiensNLRP135 of 10YesNo  
Homo sapiensNLRP145 of 10YesNo  
Homo sapiensNLRP25 of 10YesNo  
Homo sapiensNLRP125 of 10YesNo  
Mus musculusNlrp35 of 10YesNo  
Mus musculusNlrp4a5 of 10YesNo  
Mus musculusNlrp145 of 10YesNo  
Mus musculusNlrp4e5 of 10YesNo  
Mus musculusNlrp125 of 10YesNo  
Rattus norvegicusNlrp35 of 9YesNo   
Rattus norvegicusNlrp125 of 9YesNo   
Rattus norvegicusNlrp145 of 9YesNo   
Rattus norvegicusNlrp4a5 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
si:dkey-71l4.31102695936 of 8  
si:dkeyp-77c4.12102295936 of 8  
si:dkey-59l11.103103094926 of 8  
si:ch211-76m11.34102294933 of 8  
si:ch211-226o13.15103791886 of 8  
si:zfos-364h11.16102479696 of 8  
si:ch211-214b16.37114271605 of 8  
zmp:00000010208108474616 of 8  
si:ch211-278p9.19103874646 of 8  
si:ch73-236c18.210105271646 of 8  
si:ch211-236p5.211105973635 of 8  
si:ch73-236c18.512101574675 of 8  
si:dkey-222h21.113101375675 of 8  
si:ch211-15j1.114102474665 of 8  
si:ch211-114l13.1315102374665 of 8  
nlrc1016102474665 of 8  
si:dkey-222h21.317102473665 of 8  
si:dkey-222h21.918101574665 of 8  
si:ch211-15j1.519101574665 of 8  
si:dkey-222h21.1120102473665 of 8  
si:dkey-222h21.221102473655 of 8  
si:ch73-236c18.722101673665 of 8  
si:dkey-222h21.1023102573655 of 8  
si:dkey-13n15.1124114668536 of 8  
zgc:19490625102473655 of 8  
si:ch211-114l13.126102473655 of 8  
si:dkey-222h21.827102472645 of 8  
si:dkey-222h21.728101572645 of 8  
si:ch211-278p9.229102476652 of 8  
si:dkey-222h21.530101373653 of 8  
si:ch211-236p5.331102571625 of 8  
si:ch211-196h24.132103571595 of 8  
si:ch211-194e1.933102371615 of 8  
si:dkey-7i4.134103072566 of 8  
si:dkey-71l4.435102871604 of 8  
si:ch211-207e19.236103970594 of 8  
si:ch211-194e1.737102370605 of 8  
si:ch211-133h13.138102871594 of 8  
si:ch211-197e7.139104370574 of 8  
si:dkey-82i20.140103570593 of 8  
si:dkey-165e24.141104269574 of 8  
si:dkey-29j8.142104269593 of 8  
si:dkeyp-100h4.143103769564 of 8  
si:dkey-11n14.144104269564 of 8  
si:ch211-255g12.845102967545 of 8  
si:dkey-165o8.146103665554 of 8  
si:ch211-232d10.147103965544 of 8  
nlrp348104067505 of 8  
zgc:17418049103864544 of 8  
si:ch211-227p7.550103065544 of 8  
si:dkey-178j11.551103764534 of 8  
si:ch211-22k7.95262893917 of 8  
si:ch211-237a4.253102864524 of 8  
si:rp71-7l19.254103664514 of 8  
si:dkey-264f17.255103563524 of 8  
si:ch211-203c5.356103664513 of 8  
si:cabz01069012.257103664513 of 8  
si:ch73-50f9.458104062484 of 8  
si:ch211-201o1.159103362443 of 8  
si:dkey-121n8.76099061454 of 8  
si:ch211-149a19.36189167503 of 8  
nlrc86289465483 of 8  
nlrc66384868503 of 8  
nlrc764103755413 of 8  
si:ch211-233m11.16584966494 of 8  
si:ch73-168d20.16688666473 of 8  
si:ch73-24k9.26784968493 of 8  
si:ch211-196h16.56885167493 of 8  
nlrp12l6993460434 of 8  
si:dkey-23k10.27084266464 of 8  
si:ch211-213a13.97192360433 of 8  
si:ch211-191a16.57290657414 of 8  
nlrp167384961454 of 8  
nlrc117483763453 of 8  
si:ch211-181d7.17585060443 of 8  
si:ch211-191a16.27685460433 of 8  
si:dkey-124l13.17766964473 of 8  
si:dkey-151g22.17861365484 of 8  
si:dkey-27n6.17961365483 of 8  
si:dkeyp-123a12.28060165454 of 8  
si:dkey-233e3.28160564444 of 8  
si:dkeyp-35e5.58260164454 of 8  
si:ch211-271g18.18361163453 of 8  
si:dkeyp-4c4.18460462443 of 8  
si:ch211-171l17.48560163452 of 8  
si:ch73-233m11.28688142263 of 8  
nod28785544263 of 8  
si:dkey-118k5.38884541253 of 8  
nlrc58993938213 of 8  
si:dkey-23k10.39077542283 of 8  
ciita9190139232 of 8  
nlrx19285139223 of 8  
nlrc3l19354260372 of 8  
nod19480641222 of 8  
si:ch211-11p18.69557544302 of 8  
si:ch211-250k18.79631459402 of 8  
zgc:1737099729233204 of 8  
si:dkey-193i10.4986 of 8  
si:ch211-227e10.6997841273 of 8  
zgc:1749441005 of 8  
si:ch211-15j1.41005 of 8  
si:ch211-15j1.31014 of 8  
si:dkey-51d8.11014 of 8  
si:ch211-238e22.81023 of 8  
si:ch211-205a14.11023 of 8  
si:ch211-238e22.71023 of 8  
nlrc91023 of 8  
si:ch211-256e16.111023 of 8  
si:ch211-76m11.81023 of 8  
si:dkey-61p9.91023 of 8  
zgc:1101711023 of 8  
si:ch211-196h16.41032 of 8  
si:ch211-187g4.11032 of 8  
nlrc3l21032 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
47.082M47.084M47.086M47.088M47.090M47.092M47.094M47.096M

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available