Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | SLC6A5 | 2 of 9 | Yes | Yes | ☑ ☐☐☐☐☐☐☑☐ |
Homo sapiens | SLC6A14 | 2 of 9 | Yes | Yes | ☑ ☐☐☐☐☐☐☑☐ |
Mus musculus | Slc6a5 | 2 of 9 | Yes | Yes | ☑ ☐☐☐☐☐☐☑☐ |
Rattus norvegicus | Slc6a5 | 2 of 9 | Yes | Yes | ☑ ☐☐☐☐☐☐☑☐ |
Xenopus tropicalis | slc6a5 | 2 of 9 | Yes | Yes | ☑ ☐☐☐☐☐☑☐☐ |
Danio rerio | slc6a5 | 2 of 9 | Yes | Yes | ☑ ☐☐☐☐☐☐☑☐ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
snf-5 | 1 | 767 | 45 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
dat-1 | 2 | 643 | 52 | 30 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
mod-5 | 3 | 635 | 53 | 31 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
snf-11 | 4 | 649 | 51 | 28 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
snf-9 | 5 | 700 | 45 | 27 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
snf-7 | 6 | 702 | 47 | 25 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
snf-12 | 7 | 714 | 44 | 25 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
snf-2 | 8 | 655 | 47 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
snf-3 | 9 | 562 | 51 | 28 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
snf-10 | 10 | 674 | 41 | 22 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
snf-1 | 11 | 671 | 40 | 23 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
F56F4.3 | 12 | 564 | 39 | 22 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
Y43D4A.1 | 13 | 40 | 70 | 42 | 2 of 8 | ☑ ☐☐☐☐☐☑☐ |
Phenotype Term | Annotation details | References |
---|---|---|
amplitude of sinusoidal movement variant | ||
backward point velocity increased | ||
body posture amplitude decreased | ||
body posture wavelength decreased | ||
coiling frequency decreased | ||
fat | ||
forward point velocity increased | ||
frequency of body bend variant | ||
head bend angle variant | ||
nose movement increased |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
eg28 | allele with one associated variant | point mutation
| Yes | Yes | |||
NC_003281.10:g.1527344T>A | variant | SNP
| |||||
NC_003281.10:g.1528091C>T | variant | SNP
| |||||
NC_003281.10:g.1531227G>A | variant | SNP
| |||||
NC_003281.10:g.1531707C>T | variant | SNP
| |||||
NC_003281.10:g.1522486T>C | variant | SNP
| |||||
NC_003281.10:g.1524856C>T | variant | SNP
| |||||
NC_003281.10:g.1526175A>C | variant | SNP
| |||||
NC_003281.10:g.1527284G>A | variant | SNP
| |||||
NC_003281.10:g.1527319C>T | variant | SNP
|
snf-6 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | dlg-1 | Caenorhabditis elegans | protein |
| PMID:18711339 | |
protein | dlg-1 | Caenorhabditis elegans | protein |
| PMID:18711339 | |
protein | dsh-1 | Caenorhabditis elegans | protein |
| PMID:18711339 | |
protein | lin-7 | Caenorhabditis elegans | protein |
| PMID:18711339 | |
protein | mpz-1 | Caenorhabditis elegans | protein |
| PMID:18711339 | |
protein | stn-1 | Caenorhabditis elegans | protein |
| PMID:15318222 | |
protein | stn-2 | Caenorhabditis elegans | protein |
| PMID:18711339 |
snf-6 role | snf-6 genetic perturbation | Interactor gene | Interactor species | Interactor role | Interactor genetic perturbation | Interaction type | Phenotype or trait | Source | Reference |
---|---|---|---|---|---|---|---|---|---|
unspecified role | ace-1 | Caenorhabditis elegans | unspecified role | genetic interaction | PMID:15318222 |