Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Mus musculus | Cd1d2 | 9 of 10 | Yes | Yes | ☐☑☑☑☑☑☑☑☑☑ |
Mus musculus | Cd1d1 | 9 of 10 | Yes | Yes | ☐☑☑☑☑☑☑☑☑☑ |
Rattus norvegicus | Cd1d1 | 9 of 10 | Yes | Yes | ☐☑☑☑☑☑☑☑☑☑ |
Danio rerio | mhc1lfa | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lea | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lda | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lca | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1laa | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lla | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lja | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lga | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | si:dkey-52p2.5 | 3 of 10 | Yes | Yes | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Danio rerio | mhc1lba | 3 of 10 | Yes | No | ☑ ☐☐☐☐☑☑☐☐ ☐ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
CD1E | 1 | 342 | 68 | 54 | 5 of 8 | ☑ ☐☐☑☑☑☑☐ |
CD1A | 2 | 330 | 69 | 52 | 5 of 8 | ☑ ☐☐☑☑☑☑☐ |
CD1B | 3 | 331 | 66 | 53 | 5 of 8 | ☑ ☐☐☑☑☑☑☐ |
CD1C | 4 | 299 | 65 | 51 | 5 of 8 | ☑ ☐☐☑☑☑☑☐ |
HFE | 5 | 355 | 43 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-F | 6 | 419 | 34 | 22 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-B | 7 | 347 | 40 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-G | 8 | 347 | 38 | 25 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-A | 9 | 350 | 38 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
MICA | 10 | 329 | 42 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
FCGRT | 11 | 336 | 42 | 27 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
AZGP1 | 12 | 297 | 39 | 28 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-C | 13 | 302 | 40 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-E | 14 | 290 | 40 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
RAET1G | 15 | 349 | 33 | 21 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
MICB | 16 | 291 | 41 | 22 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
MR1 | 17 | 290 | 40 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
RAET1E | 18 | 306 | 33 | 21 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
ULBP2 | 19 | 247 | 35 | 21 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
RAET1L | 20 | 246 | 34 | 20 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
ULBP3 | 21 | 239 | 33 | 21 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
ULBP1 | 22 | 261 | 27 | 20 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
HLA-H | 23 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
Phenotype Term | Annotation details | References |
---|---|---|
Pulmonary tuberculosis |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
NC_000001.11:g.158181715T>G | variant | SNP
| |||||
NC_000001.11:g.158182055G>T | variant | SNP
| |||||
NC_000001.11:g.158183995C>T | variant | SNP
| |||||
NC_000001.11:g.158182073C>T | variant | SNP
| |||||
NC_000001.11:g.158184136C>G | variant | SNP
| |||||
NC_000001.11:g.158184014C>T | variant | SNP
| |||||
NC_000001.11:g.158181138C>T | variant | SNP
| |||||
NC_000001.11:g.158181133C>A | variant | SNP
| |||||
NC_000001.11:g.158181583A>T | variant | SNP
| |||||
NC_000001.11:g.158182962C>T | variant | SNP
|
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Mus musculus | Cd1d1em3(CD1D)Smoc |
CD1D molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | B2M | Homo sapiens | protein |
| PMID:10221650 | |
protein | B2M | Homo sapiens | protein |
| PMID:17581592 | |
protein | CALR | Homo sapiens | protein |
| PMID:12239218 | |
protein | CANX | Homo sapiens | protein |
| PMID:12239218 | |
protein | DLG1 | Homo sapiens | protein |
| PMID:30126976 | |
protein | DLG1 | Homo sapiens | protein |
| PMID:30126976 | |
protein | MINDY1 | Homo sapiens | protein |
| PMID:33961781 | |
protein | P4HTM | Homo sapiens | protein |
| PMID:11257307 | |
protein | PTPRC | Homo sapiens | protein |
| PMID:10473580 |