Species

Saccharomyces cerevisiae

Symbol

RBH1

Name

Ran Binding domain Homolog

Synonyms

YJL181W

Biotype

protein coding gene

Automated Description

Not Available

SGD Description

Putative protein of unknown function; expression is cell-cycle regulated as shown by microarray analysis; potential regulatory target of Mbp1p, which binds to the YJL181W promoter region; contains a PH-like domain; RBH1 has a paralog, RBH2, that arose from the whole genome duplication

Cross References

Additional Information

Literature

Orthology

Gene tree: Not Available

No data available

Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse

Paralogy

Gene symbol	Rank	Alignment Length (aa)	Similarity %	Identity %	Method Count	Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
RBH2	1	765	42	24	3 of 9	☑ ☐☐☑☐☐☐☐☑

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources

SGD

Other Sources

None

Phenotype Term

Annotation details

References

decreased resistance to chemicals

View

increased competitive fitness

View

PMID:18622397

viable

View

PMID:12140549

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Disease Associations

	all annotations		all disease by infectious agent	bacterial infectious disease	fungal infectious disease	parasitic infectious disease	viral infectious disease		all disease of anatomical entity	cardiovascular system disease	central nervous system disease	endocrine system disease	gastrointestinal system disease	hematopoietic system disease	immune system disease	integumentary system disease	musculoskeletal system disease	peripheral nervous system disease	reproductive system disease	respiratory system disease	sensory system disease	thoracic disease	urinary system disease		all disease of cellular proliferation	benign neoplasm	cancer	pre-malignant neoplasm		all genetic disease	chromosomal disease	monogenic disease	polygenic disease		all other disease	disease of mental health	disease of metabolism	physical disorder	syndrome
RBH1 (Sce)

Cell color indicative of annotation volume

No data available

Alleles and Variants

Genome location

ChrX:85660...87495 + (1.84 kb)

Assembly version

R64-5-1

Viewer Help

Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Allele/Variant Symbol	Allele Synonyms	Category	Variant
yjl181w-Δ	yjl181w-delta	allele
rbh1-Δ		allele		Yes
rbh1-Q64K		allele
NC_001142.9:g.86351G>A		variant	NC_001142.9:g.86351G>A SNP missense variant
NC_001142.9:g.85671C>T		variant	NC_001142.9:g.85671C>T SNP synonymous variant
NC_001142.9:g.88021C>T		variant	NC_001142.9:g.88021C>T SNP intergenic variant
NC_001142.9:g.85615T>C		variant	NC_001142.9:g.85615T>C SNP intergenic variant
NC_001142.9:g.85454A>G		variant	NC_001142.9:g.85454A>G SNP intergenic variant
NC_001142.9:g.86039A>G		variant	NC_001142.9:g.86039A>G SNP missense variant
NC_001142.9:g.86090T>C		variant	NC_001142.9:g.86090T>C SNP missense variant

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View detailed Alleles/Variants information

Download all Alleles/Variants for all genes of the species

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location

ChrX:85660...87495 + (1.84 kb)

Assembly version

R64-5-1

Viewer Help

Sequence Details

Transcript: Mode:

Expression

Primary Sources

Other Sources

	all annotations		all cellular components	extracellular region	plasma membrane	synapse	cell junction	cell projection	cytoplasmic vesicle	endosome	vacuole	golgi apparatus	endoplasmic reticulum	cytosol	mitochondrion	nucleus	chromosome	cytoskeleton	protein-containing complex	other locations
RBH1 (Sce)

Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

45 interactor genes based on 48 annotations

RBH1 molecule type	Interactor gene	Interactor species	Interactor molecule type	Detection methods	Source	Reference
RNA	CAF20	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:2874161	PMID:25973932
RNA	CCR4	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:2354033	PMID:29158339
RNA	DHH1	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:2351293	PMID:29158339
RNA	DHH1	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:2390071	PMID:27821408
RNA	ISW1	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:2337046	PMID:27863241
RNA	MPT5	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:2348804	PMID:29158339
RNA	NAB2	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:350765	PMID:19840948
protein	PHO85	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:440186	PMID:20489023
RNA	PUF3	Saccharomyces cerevisiae	protein	affinity chromatography technology	biogrid:1426661	PMID:26493364
protein	SSB2	Saccharomyces cerevisiae	protein	biochemical	biogrid:1062142	PMID:23332755

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Genetic Interactions

RBH1 role	Interactor gene	Interactor species	Interactor role	Interaction type	Phenotype or trait	Source	Reference
unspecified role	ALE1	Saccharomyces cerevisiae	unspecified role	positive genetic interaction (sensu BioGRID)	colony size	biogrid:1909715	PMID:27708008
unspecified role	ASF1	Saccharomyces cerevisiae	unspecified role	negative genetic interaction (sensu BioGRID)	colony size	biogrid:223240	PMID:17314980
unspecified role	BUD21	Saccharomyces cerevisiae	unspecified role	negative genetic interaction (sensu BioGRID)	colony size	biogrid:2137677	PMID:27708008
unspecified role	CCZ1	Saccharomyces cerevisiae	unspecified role	negative genetic interaction (sensu BioGRID)	colony size	biogrid:2137673	PMID:27708008
unspecified role	CDC9	Saccharomyces cerevisiae	unspecified role	positive genetic interaction (sensu BioGRID)	colony size	biogrid:1879663	PMID:27708008
unspecified role	CKS1	Saccharomyces cerevisiae	unspecified role	negative genetic interaction (sensu BioGRID)	colony size	biogrid:222757	PMID:17314980
unspecified role	CSF1	Saccharomyces cerevisiae	unspecified role	positive genetic interaction (sensu BioGRID)	colony size	biogrid:225430	PMID:17314980
unspecified role	CYT1	Saccharomyces cerevisiae	unspecified role	negative genetic interaction (sensu BioGRID)	colony size	biogrid:2137676	PMID:27708008
unspecified role	DBF2	Saccharomyces cerevisiae	unspecified role	negative genetic interaction (sensu BioGRID)	colony size	biogrid:1984882	PMID:27708008
unspecified role	DED1	Saccharomyces cerevisiae	unspecified role	positive genetic interaction (sensu BioGRID)	colony size	biogrid:3494082	PMID:36409020

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